I’ve been looking online for an answer but can’t find anything that works. It sounds like your ome.tif files are malformed or not actually in the format you think they are. For users - Fiji is easy to install and has an automatic update function, bundles a lot of plugins and offers comprehensive documentation. For some distributions, most notably Fiji, the JRE has to be version 1.6. Fiji is an image processing packagea batteries-included distribution of ImageJ2, bundling a lot of plugins which facilitate scientific image analysis.
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